mirror of
https://gitlab.com/metagrowing/kandid.git
synced 2026-02-03 13:29:34 +01:00
118 lines
4.0 KiB
Bash
Executable File
118 lines
4.0 KiB
Bash
Executable File
#!/bin/bash
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clear
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export TMP=/tmp
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expand_xslt () {
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echo -- $1 --
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java -classpath $CLASSPATH org.apache.xalan.xslt.Process -XSL src/kandid/soup/schema/$1.xsl -IN src/kandid/soup/schema/soup.xsd -OUT $TMP/$2.txt
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java -classpath classes:$CLASSPATH kandid.soup.helper.Uppercase $TMP/$2.txt src/kandid/$3/$2.java
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if [ -f src/kandid/$3/$2.tmp ]; then
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rm src/kandid/$3/$2.tmp
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fi
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java -jar ./buildlib/google-java-format-1.30.0-all-deps.jar src/kandid/$3/$2.java > src/kandid/$3/$2.tmp
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if [ -f java ]; then
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rm java
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fi
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mv src/kandid/$3/$2.tmp src/kandid/$3/$2.java
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}
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echo ------------------------------------------------------------------------------------
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echo -- clean --
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mkdir $TMP
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mkdir classes
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rm src/kandid/soup/*.java
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rm classes/kandid/soup/*.class
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rm src/kandid/pond/*.java
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rm classes/kandid/pond/*.class
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rm src/kandid/catalog/*.java
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rm classes/kandid/catalog/*.class
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rm src/kandid/genomedb/*.java
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rm classes/kandid/genomedb/*.class
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rm src/kandid/preference/*.java
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rm classes/kandid/preference/*.class
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rm $TMP/SetEditorMapping.txt
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rm $TMP/RandomizeChromosome.txt
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rm $TMP/MutateChromosome.txt
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rm $TMP/CloneChromosome.txt
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rm $TMP/MergeChromosome.txt
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rm $TMP/scalarvm.txt
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rm $TMP/vectorvm.txt
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rm $TMP/scalarvm.txt
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mkdir -p src/kandid/soup/map
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mkdir -p src/kandid/calculation/vm/scalar
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mkdir -p src/kandid/calculation/vm/vector
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mkdir -p src/kandid/calculation/bridge/povray
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export CLASSPATH=.:buildlib/xalan.jar:buildlib/xml-apis.jar:buildlib/xercesImpl.jar
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javac -d classes src/kandid/soup/helper/*.java
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expand_xslt setEditor SetEditorMapping soup/map
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expand_xslt random RandomizeChromosome soup/map
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expand_xslt mutate MutateChromosome soup/map
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expand_xslt clone CloneChromosome soup/map
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expand_xslt merge MergeChromosome soup/map
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expand_xslt scalarvm ScalarVM calculation/vm/scalar
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expand_xslt vectorvm VectorVM calculation/vm/vector
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export XJC=/usr/share/jaxb/bin/xjc.zip.sh
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echo -- schema soup --
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cd src
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$XJC kandid/soup/schema/soup.xsd -p kandid.soup
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cd ..
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cp src/kandid/soup/PopulationType.java $TMP/PopulationType.java
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java -classpath classes:$CLASSPATH kandid.soup.helper.InsertRootElement $TMP/PopulationType.java src/kandid/soup/PopulationType.java
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cp src/kandid/soup/EntityType.java $TMP/EntityType.java
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java -classpath classes:$CLASSPATH kandid.soup.helper.InsertRootElement $TMP/EntityType.java src/kandid/soup/EntityType.java
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echo -- schema catalog --
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cd src
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$XJC kandid/catalog/schema/catalog.xsd -p kandid.catalog
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cd ..
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echo -- schema genomedb --
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cd src
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$XJC kandid/genomedb/schema/genomedb.xsd -p kandid.genomedb
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cd ..
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echo -- schema pond --
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cd src
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$XJC kandid/pond/schema/pond.xsd -p kandid.pond
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cd ..
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echo -- schema preference --
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cd src
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$XJC kandid/preference/schema/preference.xsd -p kandid.preference
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cd ..
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#kandid/preference/PreferenceType
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#cp src/kandid/preference/PreferenceType.java $TMP/PreferenceType.java
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#java -classpath classes:$CLASSPATH kandid.soup.helper.InsertRootElement $TMP/PreferenceType.java src/kandid/preference/PreferenceType.java
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#export JAXB_LIBS=$JAXB_HOME/lib
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#export CLASSPATH=buildlib/junit.jar:/usr/share/maven-repo/javax/xml/bind/jaxb-api/2.3.1/jaxb-api-2.3.1.jar
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#echo -- compile soup --
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#javac -d classes -sourcepath src src/kandid/soup/*.java src/kandid/soup/map/*.java src/kandid/soup/test/*.java
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#echo -- compile catalog --
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#javac -d classes -sourcepath src src/kandid/catalog/*.java
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#echo -- compile genomedb --
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#javac -d classes -sourcepath src src/kandid/genomedb/*.java
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#echo -- compile pond --
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#javac -d classes -sourcepath src src/kandid/pond/*.java src/kandid/pond/test/*.java
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#echo -- compile preference --
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#javac -d classes -sourcepath src src/kandid/preference/*.java
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#echo -- test soup --
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#java -ea -esa -classpath classes:$CLASSPATH kandid.soup.test.AllTests
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#echo -- test pond --
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#java -ea -esa -classpath classes:$CLASSPATH kandid.pond.test.AllTests
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#echo -- test catalog --
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#java -ea -esa -classpath classes:$CLASSPATH kandid.catalog.test.AllTests
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#echo -- test genomedb --
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#java -ea -esa -classpath classes:$CLASSPATH kandid.genomedb.test.AllTests
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